Bioinformatics Algorithms

Presents algorithmic techniques for solving problems in bioinformatics, including applications that shed new light on molecular biology This book introduces algorithmic techniques in bioinformatics, emphasizing their application to solving novel problems in post-genomic molecular biology. Beginning with a thought-provoking discussion on the role of algorithms in twenty-first-century bioinformatics education, Bioinformatics Algorithms covers: General algorithmic techniques, including dynamic programming, graph-theoretical methods, hidden Markov models, the fast Fourier transform, seeding, and approximation algorithms Algorithms and tools for genome and sequence analysis, including formal and approximate models for gene clusters, advanced algorithms for non-overlapping local alignments and genome tilings, multiplex PCR primer set selection, and sequence/network motif finding Microarray design and analysis, including algorithms for microarray physical design, missing value imputation, and meta-analysis of gene expression data Algorithmic issues arising in the analysis of genetic variation across human population, including computational inference of haplotypes from genotype data and disease association search in case/control epidemiologic studies Algorithmic approaches in structural and systems biology, including topological and structural classification in biochemistry, and prediction of protein-protein and domain-domain interactions Each chapter begins with a self-contained introduction to a computational problem; continues with a brief review of the existing literature on the subject and an in-depth description of recent algorithmic and methodological developments; and concludes with a brief experimental study and a discussion of open research challenges. This clear and approachable presentation makes the book appropriate for researchers, practitioners, and graduate students alike.

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  • Author : Ion Mandoiu
  • Publisher : John Wiley & Sons
  • Pages : 528 pages
  • ISBN : 0470097736
  • Rating : 4/5 from 21 reviews
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Bioinformatics Algorithms

Bioinformatics Algorithms
  • Author : Phillip Compeau,Pavel Pevzner
  • Publisher : Unknown Publisher
  • Release : 01 June 1986
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Bioinformatics Algorithms: an Active Learning Approach is one of the first textbooks to emerge from the recent Massive Online Open Course (MOOC) revolution. A light-hearted and analogy-filled companion to the authors' acclaimed online course (http://coursera.org/course/bioinformatics), this book presents students with a dynamic approach to learning bioinformatics. It strikes a unique balance between practical challenges in modern biology and fundamental algorithmic ideas, thus capturing the interest of students of biology and computer science students alike.Each chapter

Bioinformatics Algorithms

Bioinformatics Algorithms
  • Author : Ion Mandoiu,Alexander Zelikovsky
  • Publisher : John Wiley & Sons
  • Release : 25 February 2008
GET THIS BOOKBioinformatics Algorithms

Presents algorithmic techniques for solving problems in bioinformatics, including applications that shed new light on molecular biology This book introduces algorithmic techniques in bioinformatics, emphasizing their application to solving novel problems in post-genomic molecular biology. Beginning with a thought-provoking discussion on the role of algorithms in twenty-first-century bioinformatics education, Bioinformatics Algorithms covers: General algorithmic techniques, including dynamic programming, graph-theoretical methods, hidden Markov models, the fast Fourier transform, seeding, and approximation algorithms Algorithms and tools for genome and sequence analysis, including

Bioinformatics Algorithms

Bioinformatics Algorithms
  • Author : Miguel Rocha,Pedro G. Ferreira
  • Publisher : Academic Press
  • Release : 08 June 2018
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Bioinformatics Algorithms: Design and Implementation in Python provides a comprehensive book on many of the most important bioinformatics problems, putting forward the best algorithms and showing how to implement them. The book focuses on the use of the Python programming language and its algorithms, which is quickly becoming the most popular language in the bioinformatics field. Readers will find the tools they need to improve their knowledge and skills with regard to algorithm development and implementation, and will also uncover

Bioinformatics

Bioinformatics
  • Author : N. Gautham
  • Publisher : Alpha Science Int'l Ltd.
  • Release : 06 May 2021
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&Quot;Bioinformatics: Databases and Algorithms has two features that distinguish it from others in this genre. First, it seeks to explain some of the basic algorithms in bioinformatics to readers who have little exposure to computer science and mathematics. Second, it deals with structural bioinformatics in greater depth than most other books. The emphasis of this book is on algorithms, though databases have not been entirely neglected, and they have a whole chapter to themselves. Also much attention is given

Structural Bioinformatics

Structural Bioinformatics
  • Author : Forbes J. Burkowski
  • Publisher : CRC Press
  • Release : 30 October 2008
GET THIS BOOKStructural Bioinformatics

The Beauty of Protein Structures and the Mathematics behind Structural Bioinformatics Providing the framework for a one-semester undergraduate course, Structural Bioinformatics: An Algorithmic Approach shows how to apply key algorithms to solve problems related to macromolecular structure. Helps Students Go Further in Their Study of Structural Biology Following some introductory material in the first few chapters, the text solves the longest common subsequence problem using dynamic programming and explains the science models for the Nussinov and MFOLD algorithms. It then

Pattern Discovery in Bioinformatics

Pattern Discovery in Bioinformatics
  • Author : Laxmi Parida
  • Publisher : CRC Press
  • Release : 04 July 2007
GET THIS BOOKPattern Discovery in Bioinformatics

The computational methods of bioinformatics are being used more and more to process the large volume of current biological data. Promoting an understanding of the underlying biology that produces this data, Pattern Discovery in Bioinformatics: Theory and Algorithms provides the tools to study regularities in biological data. Taking a systema

Genome-Scale Algorithm Design

Genome-Scale Algorithm Design
  • Author : Veli Mäkinen,Djamal Belazzougui,Fabio Cunial,Alexandru I. Tomescu
  • Publisher : Cambridge University Press
  • Release : 07 May 2015
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Provides an integrated picture of the latest developments in algorithmic techniques, with numerous worked examples, algorithm visualisations and exercises.

Computational Molecular Biology

Computational Molecular Biology
  • Author : S. Istrail,P. Pevzner,R. Shamir
  • Publisher : Gulf Professional Publishing
  • Release : 16 April 2003
GET THIS BOOKComputational Molecular Biology

This volume contains papers demonstrating the variety and richness of computational problems motivated by molecular biology. The application areas within biology that give rise to the problems studied in these papers include solid molecular modeling, sequence comparison, phylogeny, evolution, mapping, DNA chips, protein folding and 2D gel technology. The mathematical techniques used are algorithmics, combinatorics, optimization, probability, graph theory, complexity and applied mathematics. This is the fourth volume in the Discrete Applied Mathematics series on computational molecular biology, which is

BIOINFORMATICS ALGORITHMS (An Introduction)

BIOINFORMATICS ALGORITHMS (An Introduction)
  • Author : Na Vikraman
  • Publisher : Independently Published
  • Release : 21 July 2020
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This book has been written for the Medical/Pharmacy/Nursing/ME/M.TECH/BE/B.Tech students of All University with latest syllabus for ECE, EEE, CSE, IT, Mechanical, Bio Medical, Bio Tech, BCA, MCA and All B.Sc Department Students. The basic aim of this book is to provide a basic knowledge in BioInformatics Algorithms.BioInformatics Algorithms Syllabus students of degree, diploma & AMIE courses and a useful reference for these preparing for competitive examinations. All the concepts are explained

Algorithmic Aspects of Bioinformatics

Algorithmic Aspects of Bioinformatics
  • Author : Hans-Joachim Böckenhauer,Dirk Bongartz
  • Publisher : Springer Science & Business Media
  • Release : 06 June 2007
GET THIS BOOKAlgorithmic Aspects of Bioinformatics

This book introduces some key problems in bioinformatics, discusses the models used to formally describe these problems, and analyzes the algorithmic approaches used to solve them. After introducing the basics of molecular biology and algorithmics, Part I explains string algorithms and alignments; Part II details the field of physical mapping and DNA sequencing; and Part III examines the application of algorithmics to the analysis of biological data. Exciting application examples include predicting the spatial structure of proteins, and computing haplotypes

Algorithms in Bioinformatics

Algorithms in Bioinformatics
  • Author : Dan Brown,Burkhard Morgenstern
  • Publisher : Springer
  • Release : 15 August 2014
GET THIS BOOKAlgorithms in Bioinformatics

This book constitutes the refereed proceedings of the 14th International Workshop on Algorithms in Bioinformatics, WABI 2014, held in Wroclaw, Poland, in September 2014. WABI 2014 was one of seven conferences that were organized as part of ALGO 2014. WABI is an annual conference series on all aspects of algorithms and data structure in molecular biology, genomics and phylogeny data analysis. The 26 full papers presented together with a short abstract were carefully reviewed and selected from 61 submissions. The selected papers cover a wide range

Algorithms in Bioinformatics

Algorithms in Bioinformatics
  • Author : Roderic Guigo,Dan Gusfield
  • Publisher : Springer Science & Business Media
  • Release : 02 September 2002
GET THIS BOOKAlgorithms in Bioinformatics

We are pleased to present the proceedings of the Second Workshop on Al- rithms in Bioinformatics (WABI 2002), which took place on September 17-21, 2002 in Rome, Italy. The WABI workshop was part of a three-conference me- ing, which, in addition to WABI, included the ESA and APPROX 2002. The three conferences are jointly called ALGO 2002, and were hosted by the F- ulty of Engineering, University of Rome “La Sapienza”. Seehttp://www.dis. uniroma1.it/ ̃algo02 for more details. The Workshop on Algorithms